Helden Oligo-Analysis (Motif Search Motif Search)
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Time Complexity
$O(mn)$
Space Complexity
$O(m)$ words
(Derived: store number of occurances for each motif of a specified length)
Description
Uses oligonucleotides? Also only detects "short" motifs, and used for yeast
Approximate?
Exact
Randomized?
No, deterministic
Model of Computation
Word RAM
Year
1998