FASTA (Edit sequence, local alignment Sequence Alignment)

From Algorithm Wiki
Jump to navigation Jump to search

Time Complexity

$O(mn)$

Space Complexity

$O(mn)$ words

(Uses an m*n array, whose contents are of size O(1))

Description

Approximate?

Exact

Randomized?

No, deterministic

Model of Computation

Word RAM

Year

1985

Reference

https://www.ncbi.nlm.nih.gov/pubmed/2983426