Bailey TL; Elkan C MEME (Motif Search Motif Search)

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Time Complexity

$O(n^{2}m^{2})$

Space Complexity

$O(mn)$ words

(Uses iterations of the EM algorithm as in (Lawrence, Reilly 1990), and thus uses similar amounts of space)

Description

Approximate?

Exact

Randomized?

No, deterministic

Model of Computation

Word RAM

Year

1995

Reference

https://link.springer.com/article/10.1007/BF00993379