Gapped BLAST (Edit Sequence, constant-size alphabet Sequence Alignment)

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Revision as of 12:14, 15 February 2023 by Admin (talk | contribs) (Created page with "== Time Complexity == $O(mn)$ == Space Complexity == $O(mn)$? words (Uses at most a constant number of O(m)*O(n) arrays, whose contents are of size O(1)) == Description == == Approximate? == Exact == Randomized? == No, deterministic == Model of Computation == Word RAM == Year == 1997 == Reference == https://www.ncbi.nlm.nih.gov/pubmed/9254694")
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Time Complexity

$O(mn)$

Space Complexity

$O(mn)$? words

(Uses at most a constant number of O(m)*O(n) arrays, whose contents are of size O(1))

Description

Approximate?

Exact

Randomized?

No, deterministic

Model of Computation

Word RAM

Year

1997

Reference

https://www.ncbi.nlm.nih.gov/pubmed/9254694

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